tangram.utils.cv_data_gen

tangram.utils.cv_data_gen(adata_sc, adata_sp, cv_mode='loo')

Generates pair of training/test gene indexes cross validation datasets

Parameters

• adata_sc (AnnData) – single cell data

• adata_sp (AnnData) – gene spatial data

• mode (str) – Optional. support ‘loo’ and ‘10fold’. Default is ‘loo’.

Yields

tuple – list of train_genes, list of test_genes