tangram.mapping_optimizer
Description
Library for instantiating and running the optimizer for Tangram. The optimizer comes in two flavors, which correspond to two different classes: - Mapper: optimizer without filtering (i.e., all single cells are mapped onto space). At the end, the learned mapping matrix M is returned. - MapperConstrained: optimizer with filtering (i.e., only a subset of single cells are mapped onto space). At the end, the learned mapping matrix M and the learned filter F are returned.
Classes
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Allows instantiating and running the optimizer for Tangram, without filtering. |
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Allows instantiating and running the optimizer for Tangram, with filtering. |